Application of functional framework materials in C1 biotransformation

DI Zeyan; ZHOU Shuo; YANG Mingfang; LIU Xin; CHEN Yao

doi:10.12211/2096-8280.2025-003

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Application of functional framework materials in C1 biotransformation

更新时间：2025-03-11

- Application of functional framework materials in C1 biotransformation
- Synthetic Biology Journal Pages: 1-18(2025)
- 作者机构：
  
  1.中国科学院过程工程研究所，生物药制备与递送全国重点实验室，北京100190
  2.南开大学，药物化学生物全国重点实验室，天津300071
- 作者简介：
- 基金信息：
- DOI：10.12211/2096-8280.2025-003
  CLC： Q81
- Received：02 January 2025，
  
  Revised：2025-03-09，
  
  Online First：11 March 2025，
- 稿件说明：
移动端阅览
狄泽燕，周铄，杨铭方，刘昕，陈瑶. 功能框架材料在一碳生物转化中的应用［J］. 合成生物学， 2025， 6. DOI： 10.12211/2096-8280.2025-003

DI Zeyan， ZHOU Shuo， YANG Mingfang， LIU Xin， CHEN Yao. Application of functional framework materials in C1 biotransformation［J］. Synthetic Biology Journal， 2025， 6. DOI： 10.12211/2096-8280.2025-003
狄泽燕，周铄，杨铭方，刘昕，陈瑶. 功能框架材料在一碳生物转化中的应用［J］. 合成生物学， 2025， 6. DOI： 10.12211/2096-8280.2025-003 DOI：

DI Zeyan， ZHOU Shuo， YANG Mingfang， LIU Xin， CHEN Yao. Application of functional framework materials in C1 biotransformation［J］. Synthetic Biology Journal， 2025， 6. DOI： 10.12211/2096-8280.2025-003 DOI：

摘要

一碳化合物（CO₂、甲烷、甲醇等）的生物转化是实现绿色生物制造的重要途径，但其效率受限于气相底物捕获困难、生物催化剂稳定性不足及辅因子再生成本高、操作复杂等问题。功能框架材料（金属有机框架（MOFs）、共价有机框架（COFs）和氢键有机框架（HOFs）等）凭借其高比表面积、可调孔道结构和多功能特性，为解决上述挑战提供了新思路。本文系统综述了功能框架材料在一碳生物转化中的最新研究进展：（1）作为酶固定化载体，显著提升催化稳定性与效率；（2）构建级联催化体系；（3）开发框架材料基人工酶；（4）协同微生物催化。然而，功能框架材料在一碳生物转化中应用面临固定化酶种类受限及传质阻力、天然微生物和酶效率低、规模化成本高及工业化适配性亟待突破等挑战。未来需重点优化定向固定化策略以减少传质限制；利用合成生物学改造微生物和酶；开发低成本、可大量制备的框架材料，突破规模化生产与工业适配性瓶颈，并评估全生命周期环境影响。功能框架材料与生物催化的深度融合将为一碳资源的高值化利用提供变革性技术支撑。

Abstract

The bioconversion of one-carbon (C1) compounds (CO

methane

methanol

etc.) is a critical pathway for green biomanufacturing

yet its efficiency is constrained by challenges such as the difficulty in capturing gaseous substrates

insufficient stability of biocatalysts under harsh environmental conditions

high cost and operational complexity of cofactor regeneration

and inherent inefficiencies of natural microbial systems. Functional framework materials

including metal-organic frameworks (MOFs)

covalent organic frameworks (COFs)

and hydrogen-bonded organic frameworks (HOFs)

offer novel solutions to these challenges due to their exceptional structural versatility

high surface area

and tunable physicochemical properties. These materials enable precise control over enzyme-microbe interactions

substrate enrichment

and catalytic microenvironment optimization. This review systematically summarizes recent advancements in the application of functional framework materials for C1 bioconversion: (1) serving as enzyme immobilization carriers to enhance catalytic robustness and operational stability

(2) constructing multi-enzyme cascade systems for sequential substrate conversion

(3) developing framework-based artificial enzymes mimicking natural catalytic mechanisms

and (4) synergizing microbial catalysis through material-mediated nutrient supply and metabolic regulation. By integrating material science with biocatalysis

these approaches address critical limitations in substrate accessibility

reaction kinetics

and system scalability. However

functional framework materials in C1 bioconversion face challenges

including limited diversity in immobilized enzyme types

mass transfer constraints due to pore structure mismatches

low compatibility of natural microbial strains with industrial processes

and high costs associated with material synthesis and scale-up. Furthermore

the long-term sta

bility of frameworks under industrial operating conditions (e.g.

humidity

acidic environments) remains a significant hurdle

alongside the technical complexity of co-immobilizing enzymes and microbial cells for hybrid catalytic systems. Future efforts should prioritize: (1) designing hierarchical porous frameworks to minimize mass transfer barriers

(2) leveraging synthetic biology to engineer microbial chassis with enhanced C1 assimilation pathways

(3) developing cost-effective

scalable synthesis methods for framework materials

(4) expanding the functional scope of frameworks to include non-metallic catalytic centers and stimuli-responsive properties

and (5) validating industrial compatibility through material densification and lifecycle sustainability assessments. The deep integration of functional framework materials with biocatalysis will provide transformative technological support for the high-value utilization of C1 resources.

关键词

Keywords

references

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Related Author

WEN Yanhua

WU Ruibo

CAO Chunlai

LIU Hedong

ZHENG Yuguo

XUE Yaping

TANG Heng

XU Jianmiao

Related Institution

The United Biotechnology （Zhuhai Hengqin） Co.， Ltd.

Zhuhai United Laboratories Co.， Ltd

School of Pharmaceutical Science，Sun Yat-Sen University

The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals， Zhejiang University of Technology

Key Laboratory of Bioorganic Synthesis of Zhejiang Province， College of Biotechnology and Bioengineering， Zhejiang University of Technology

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